IRI: https://nfdi.fiz-karlsruhe.de/ontology/NFDI_0000102
IRI: https://nfdi.fiz-karlsruhe.de/ontology/NFDI_0000229
IRI: http://purl.obolibrary.org/obo/IAO_0000578
The sentence "The article has Pubmed ID 12345." contains a CRID that has two parts: one part is the CRID symbol, which is '12345'; the other part denotes the CRID registry, which is Pubmed.
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001007
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001026
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001018
IRI: https://nfdi.fiz-karlsruhe.de/ontology/NFDI_0000106
IRI: https://nfdi.fiz-karlsruhe.de/ontology/NFDI_0001058
IRI: https://nfdi.fiz-karlsruhe.de/ontology/NFDI_0000114
IRI: http://purl.obolibrary.org/obo/BFO_0000002
A human being; a tennis ball; a cave; a region of space; someone's temperature
IRI: http://purl.obolibrary.org/obo/BFO_0000140
As for fiat point, fiat line, fiat surface
IRI: https://nfdi.fiz-karlsruhe.de/ontology/NFDI_0000118
IRI: https://nfdi.fiz-karlsruhe.de/ontology/NFDI_0000119
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001006
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001022
IRI: http://purl.obolibrary.org/obo/BFO_0000016
An atom of element X has the disposition to decay to an atom of element Y; the cell wall is disposed to transport cellular material through endocytosis and exocytosis; certain people have a predisposition to colon cancer; children are innately disposed to categorize objects in certain ways
IRI: http://purl.obolibrary.org/obo/IAO_0000429
IRI: http://purl.obolibrary.org/obo/BFO_0000001
Julius Caesar
Verdi’s Requiem
the Second World War
your body mass index
Julius Caesar; the Second World War; your body mass index; Verdi's Requiem
IRI: http://purl.obolibrary.org/obo/BFO_0000024
The upper and lower lobes of the left lung; the dorsal and ventral surfaces of the body; the Western hemisphere of the Earth; the FMA:regional parts of an intact human body
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001010
IRI: http://purl.obolibrary.org/obo/BFO_0000034
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001024
IRI: http://purl.obolibrary.org/obo/BFO_0000031
The entries in your database are patterns instantiated as quality instances in your hard drive. The database itself is an aggregate of such patterns. When you create the database you create a particular instance of the generically dependent continuant type database. Each entry in the database is an instance of the generically dependent continuant type IAO: information content entity.
the pdf file on your laptop, the pdf file that is a copy thereof on my laptop
the sequence of this protein molecule; the sequence that is a copy thereof in that protein molecule.
The pdf file on your laptop; the pdf file that is a copy thereof on my laptop; the sequence of this protein molecule; the sequence that is a copy thereof in that protein molecule; the content that is shared by a string of dots and dashes written on a page and the transmitted Morse code signal; the content of a sentence; an engineering blueprint
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001013
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001014
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001025
IRI: http://purl.obolibrary.org/obo/BFO_0000182
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001030
IRI: http://purl.obolibrary.org/obo/IAO_0020000
IRI: http://purl.obolibrary.org/obo/BFO_0000141
As for fiat point, fiat line, fiat surface, site
IRI: http://purl.obolibrary.org/obo/BFO_0000004
a chair
a heart
a leg
a molecule
a spatial region
an atom
an orchestra.
an organism
the bottom right portion of a human torso
the interior of your mouth
An atom; a molecule; an organism; a heart; a chair; the bottom right portion of a human torso; a leg; the interior of your mouth; a spatial region; an orchestra
IRI: http://purl.obolibrary.org/obo/IAO_0000030
Examples of information content entites include journal articles, data, graphical layouts, and graphs.
Examples of information content entites include journal articles, data, graphical layouts, and graphs.
IRI: http://purl.obolibrary.org/obo/IAO_0000303
University of Colorado Denver School of Medicine
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001021
IRI: http://purl.obolibrary.org/obo/BFO_0000040
A human being; the undetached arm of a human being; an aggregate of human beings
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001008
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001027
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001029
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001011
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001017
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001020
IRI: http://purl.obolibrary.org/obo/BFO_0000030
An organism; a fish tank; a planet; a laptop; a valve; a block of marble; an ice cube
IRI: http://purl.obolibrary.org/obo/BFO_0000027
The aggregate of the musicians in a symphony orchestra and their instruments; the aggregate of bearings in a constant velocity axle joint; the nitrogen atoms in the atmosphere; a collection of cells in a blood biobank
IRI: http://purl.obolibrary.org/obo/BFO_0000003
As for process, history, process boundary, spatiotemporal region, zero-dimensional temporal region, one-dimensional temporal region, temporal interval, temporal instant.
IRI: http://purl.obolibrary.org/obo/BFO_0000038
The temporal region during which a process occurs
IRI: http://purl.obolibrary.org/obo/OBI_0000245
PMID: 16353909.AAPS J. 2005 Sep 22;7(2):E274-80. Review. The joint food and agriculture organization of the United Nations/World Health Organization Expert Committee on Food Additives and its role in the evaluation of the safety of veterinary drug residues in foods.
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001012
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001019
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001000
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001035
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001036
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001001
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001033
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001002
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001034
IRI: https://nfdi.fiz-karlsruhe.de/ontology/NFDI_0000005
IRI: https://nfdi.fiz-karlsruhe.de/ontology/NFDI_0001041
IRI: http://purl.obolibrary.org/obo/BFO_0000015
a process of cell-division, \ a beating of the heart
a process of meiosis
a process of sleeping
the course of a disease
the flight of a bird
the life of an organism
your process of aging.
An act of selling; the life of an organism; a process of sleeping; a process of cell-division; a beating of the heart; a process of meiosis; the taxiing of an aircraft; the programming of a computer
IRI: http://purl.obolibrary.org/obo/BFO_0000035
The boundary between the 2nd and 3rd year of your life
IRI: https://nfdi.fiz-karlsruhe.de/ontology/NFDI_0000193
IRI: http://purl.obolibrary.org/obo/IAO_0000444
IRI: http://purl.obolibrary.org/obo/BFO_0000019
The colour of a tomato; the ambient temperature of this portion of air; the length of the circumference of your waist; the shape of your nose; the shape of your nostril; the mass of this piece of gold
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001023
IRI: http://purl.obolibrary.org/obo/BFO_0000017
the disposition of this piece of metal to conduct electricity.
the disposition of your blood to coagulate
the function of your reproductive organs
the role of being a doctor
the role of this boundary to delineate where Utah and Colorado meet
The role of being a doctor; the role of this boundary to delineate where Utah and Colorado meet; the function of your reproductive organs; the disposition of your blood to coagulate; the disposition of this piece of metal to conduct electricity
IRI: http://purl.obolibrary.org/obo/BFO_0000145
IRI: http://purl.obolibrary.org/obo/BFO_0000023
John’s role of husband to Mary is dependent on Mary’s role of wife to John, and both are dependent on the object aggregate comprising John and Mary as member parts joined together through the relational quality of being married.
the priest role
the role of a boundary to demarcate two neighboring administrative territories
the role of a building in serving as a military target
the role of a stone in marking a property boundary
the role of subject in a clinical trial
the student role
The priest role; the student role; the role of subject in a clinical trial; the role of a stone in marking a property boundary; the role of a boundary to demarcate two neighbouring administrative territories; the role of a building in serving as a military target
IRI: https://nfdi.fiz-karlsruhe.de/ontology/NFDI_0001013
IRI: https://nfdi.fiz-karlsruhe.de/ontology/NFDI_0000228
IRI: http://purl.obolibrary.org/obo/BFO_0000029
A hole in a portion of cheese; a rabbit hole; the Grand Canyon; the Piazza San Marco; the kangaroo-joey-containing hole of a kangaroo pouch; your left nostril (a fiat part - the opening - of your left nasal cavity); the lumen of your gut; the hold of a ship; the interior of the trunk of your car; hole in an engineered floor joist
IRI: http://purl.obolibrary.org/obo/BFO_0000006
As for zero-dimensional spatial region, one-dimensional spatial region, two-dimensional spatial region, three-dimensional spatial region
IRI: http://purl.obolibrary.org/obo/BFO_0000011
The spatiotemporal region occupied by the development of a cancer tumour; the spatiotemporal region occupied by an orbiting satellite
IRI: http://purl.obolibrary.org/obo/BFO_0000020
Reciprocal specifically dependent continuants: the function of this key to open this lock and the mutually dependent disposition of this lock: to be opened by this key
of one-sided specifically dependent continuants: the mass of this tomato
of relational dependent continuants (multiple bearers): John’s love for Mary, the ownership relation between John and this statue, the relation of authority between John and his subordinates.
the disposition of this fish to decay
the function of this heart: to pump blood
the mutual dependence of proton donors and acceptors in chemical reactions [79
the mutual dependence of the role predator and the role prey as played by two organisms in a given interaction
the pink color of a medium rare piece of grilled filet mignon at its center
the role of being a doctor
the shape of this hole.
the smell of this portion of mozzarella
(with multiple bearers) John's love for Mary; the ownership relation between John and this statue; the relation of authority between John and his subordinates
(with one bearer) The mass of this tomato; the pink colour of a medium rare piece of grilled filet mignon at its centre; the smell of this portion of mozzarella; the disposition of this fish to decay; the role of being a doctor; the function of this heart to pump blood; the shape of this hole
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001028
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001032
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001015
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001031
IRI: http://purl.obolibrary.org/obo/BFO_0000203
IRI: http://purl.obolibrary.org/obo/BFO_0000008
As for zero-dimensional temporal region and one-dimensional temporal region
IRI: http://purl.obolibrary.org/obo/IAO_0000300
Words, sentences, paragraphs, and the written (non-figure) parts of publications are all textual entities
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001005
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001016
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001009
IRI: http://purl.obolibrary.org/obo/BFO_0000148
IRI: https://nfdi.fiz-karlsruhe.de/ontology/NFDI_0001042
IRI: http://purl.obolibrary.org/obo/BFO_0000196
A patch of ink is the bearer of a colour quality; an organism is the bearer of a temperature quality
IRI: http://purl.obolibrary.org/obo/RO_0000059
A journal article is an information artifact that inheres in some number of printed journals. For each copy of the printed journal there is some quality that carries the journal article, such as a pattern of ink. The quality (a specifically dependent continuant) concretizes the journal article (a generically dependent continuant), and both depend on that copy of the printed journal (an independent continuant).
An investigator reads a protocol and forms a plan to carry out an assay. The plan is a realizable entity (a specifically dependent continuant) that concretizes the protocol (a generically dependent continuant), and both depend on the investigator (an independent continuant). The plan is then realized by the assay (a process).
IRI: http://purl.obolibrary.org/obo/BFO_0000176
Milk teeth continuant part of human; surgically removed tumour continuant part of organism
IRI: http://purl.obolibrary.org/obo/IAO_0000235
IRI: http://purl.obolibrary.org/obo/BFO_0000183
Mouth environs process of mastication; city environs traffic
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001003
IRI: http://purl.obolibrary.org/obo/BFO_0000178
IRI: https://nfdi.fiz-karlsruhe.de/ontology/NFDI_0001006
IRI: http://purl.obolibrary.org/obo/BFO_0000222
has characteristics: functional
IRI: http://purl.obolibrary.org/obo/BFO_0000185
IRI: http://purl.obolibrary.org/obo/BFO_0000224
has characteristics: functional
IRI: https://nfdi.fiz-karlsruhe.de/ontology/NFDI_0000182
IRI: http://purl.obolibrary.org/obo/RO_0000057
this blood coagulation has participant this blood clot
this investigation has participant this investigator
this process has participant this input material (or this output material)
IRI: http://purl.obolibrary.org/obo/BFO_0000054
As for realizes
IRI: http://purl.obolibrary.org/obo/RO_0000087
this person has role this investigator role (more colloquially: this person has this role of investigator)
IRI: http://purl.obolibrary.org/obo/BFO_0000121
IRI: https://ebrahimnorouzi.github.io/pizza-bfo/PIZZABFO_0001004
IRI: http://purl.obolibrary.org/obo/BFO_0000184
has characteristics: functional, inverse functional
IRI: http://purl.obolibrary.org/obo/BFO_0000197
A shape inheres in a shaped object; a mass inheres in a material entity
IRI: http://purl.obolibrary.org/obo/RO_0001025
my brain is located in my head
this rat is located in this cage
has characteristics: transitive
IRI: http://purl.obolibrary.org/obo/BFO_0000199
has characteristics: functional
IRI: http://purl.obolibrary.org/obo/BFO_0000066
A process of digestion occurs in the interior of an organism; a process of loading artillery rounds into a tank cannon occurs in the interior of the tank
IRI: http://purl.obolibrary.org/obo/BFO_0000055
A balding process realizes a disposition to go bald; a studying process realizes a student role; a process of pumping blood realizes the pumping function of a heart
IRI: http://purl.obolibrary.org/obo/RO_0000081
this investigator role is a role of this person
IRI: http://purl.obolibrary.org/obo/BFO_0000194
Coloured object specifically depended on by colour
IRI: http://purl.obolibrary.org/obo/BFO_0000195
A shape specifically depends on the shaped object; hue, saturation and brightness of a colour sample specifically depends on each other
IRI: https://nfdi.fiz-karlsruhe.de/ontology/NFDI_0001007
IRI: http://www.w3.org/2004/02/skos/core#altLabel
IRI: http://purl.org/dc/terms/created
IRI: http://www.w3.org/2004/02/skos/core#definition
IRI: http://purl.org/dc/terms/description
IRI: http://www.w3.org/2004/02/skos/core#example
IRI: http://purl.obolibrary.org/obo/IAO_0000112
IRI: http://purl.obolibrary.org/obo/IAO_0000115
IRI: http://purl.obolibrary.org/obo/IAO_0000116
IRI: http://purl.org/dc/elements/1.1/identifier
IRI: http://purl.org/dc/terms/license
IRI: https://nfdi.fiz-karlsruhe.de/ontology/NFDI_0010015
IRI: http://www.w3.org/2004/02/skos/core#prefLabel
IRI: http://www.w3.org/2004/02/skos/core#scopeNote
IRI: http://purl.org/dc/terms/source
IRI: http://purl.org/dc/terms/title
IRI: http://www.w3.org/ns/prov#wasDerivedFrom
The authors would like to thank Silvio Peroni for developing LODE, a Live OWL Documentation Environment, which is used for representing the Cross Referencing Section of this document and Daniel Garijo for developing Widoco, the program used to create the template used in this documentation.